This shows you the differences between two versions of the page.
Next revision | Previous revision | ||
mrowisko:anthill4_desc [2025/04/21 06:31] – created tmatejuk | mrowisko:anthill4_desc [2025/04/21 06:37] (current) – removed tmatejuk | ||
---|---|---|---|
Line 1: | Line 1: | ||
- | ===== Mrowisko / Anthill ver 0.4 ===== | ||
- | |||
- | [[mrowisko: | ||
- | |||
- | [[mrowisko: | ||
- | |||
- | |||
- | <note important> | ||
- | <note important> | ||
- | |||
- | |||
- | <note important> | ||
- | <note important> | ||
- | |||
- | ---- | ||
- | ---- | ||
- | ---- | ||
- | Before sending request to install new software on computing nodes : | ||
- | * use slurm interactive session and check ( it is probably already installed ) | ||
- | * if it is not installed yet, but is is not available in standard repositories consider installing it from source in user space. You can find some examples how to do it bellow. | ||
- | * if you are not familiar with compiling software, feel free to ask | ||
- | * if you are not familiar with distributed computing and need help with computing job optimalization, | ||
- | |||
- | |||
- | Software related issues ( how to compile, how to use, benchmark, ... ) : | ||
- | |||
- | [[anthill_sri001|software CD-HIT, performance tests, more...]] \\ | ||
- | [[anthill_sri011|software rMATS, performance tests, more...]] \\ | ||
- | [[anthill_sri012|software STAR, performance tests, more...]] \\ | ||
- | [[anthill_sri013|massive ftp downloads with cluster, more...]] \\ | ||
- | [[anthill_sri015|sra-toolkit ( prefetch with ascp ), more...]] \\ | ||
- | [[anthill_sri016|software AdapterRemoval, | ||
- | [[anthill_sri017|software preseq, how to install and use, more...]] \\ | ||
- | [[anthill_sri018|software GLIMPSE2, how to install, more...]] \\ | ||
- | |||
- | ---- | ||