User Tools

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Next revision
Previous revision
mrowisko:snote001 [2025/10/19 23:28] – created tmatejukmrowisko:snote001 [2025/10/24 10:16] (current) tmatejuk
Line 7: Line 7:
  
 Training / workshop : https://training.nextflow.io/2.1.3/hello_nextflow/01_hello_world/ Training / workshop : https://training.nextflow.io/2.1.3/hello_nextflow/01_hello_world/
 +
 +Nextflow in version 22.12 removed DSL1 ([[https://www.nextflow.io/docs/edge/migrations/dsl1.html|more]]). To install nextflow with DSL1 support see [[mrowisko:snote003|install Nextflow with DSL1]].
  
 ===== install nextflow ===== ===== install nextflow =====
Line 24: Line 26:
 </code> </code>
  
-Consider adding ''nexflow'' location to your shell. In Bash, add ''export PATH="$PATH:$HOME/.local/bin"'' to '~/.bashrc'.+Consider adding ''nexflow'' location to your shell. In Bash, add ''export PATH="$PATH:$HOME/.local/bin"'' to ''~/.bashrc''.
  
  
-===== test nextflow =====+===== after install tests =====
 Confirm nextflow sucessful instalation. Confirm nextflow sucessful instalation.
  
Line 37: Line 39:
  
 tmatejuk@node090:~$ nextflow info tmatejuk@node090:~$ nextflow info
-  Version: 25.04.build 5956 +  Version: 25.10.build 10289 
-  Created: 06-10-2025 21:19 UTC (23:19 CEST) +  Created: 22-10-2025 16:26 UTC (18:26 CEST) 
-  System: Linux 6.1.0-32-amd64 +  System: Linux 6.12.48+deb13-amd64 
-  Runtime: Groovy 4.0.26 on OpenJDK 64-Bit Server VM 17.0.16+8-Debian-1deb12u1 +  Runtime: Groovy 4.0.28 on OpenJDK 64-Bit Server VM 21.0.8+9-Debian-1 
-  Encoding: UTF-8 (ANSI_X3.4-1968)+  Encoding: UTF-8 (UTF-8)
  
 tmatejuk@node090:~$ exit tmatejuk@node090:~$ exit
Line 53: Line 55:
 tmatejuk@node098:~$ nextflow run hello tmatejuk@node098:~$ nextflow run hello
  
- N E X T F L O W    version 25.04.8+ N E X T F L O W    version 25.10.0
  
-Pulling nextflow-io/hello ... +Launching `https://github.com/nextflow-io/hello` [berserk_marconi] DSL2 - revision: 2ce0b0e294 [master]
- downloaded from https://github.com/nextflow-io/hello.git +
-Launching `https://github.com/nextflow-io/hello` [desperate_venter] DSL2 - revision: 2ce0b0e294 [master]+
  
 executor >  local (4) executor >  local (4)
-[b5/f56e01] sayHello (34 of 4 ✔ +[4b/f3afc1] sayHello (4[100%] 4 of 4 _
-Bonjour world! +
 Ciao world! Ciao world!
- 
-Hola world! 
  
 Hello world! Hello world!
  
 +Bonjour world!
  
-tmatejuk@node098:~$+Hola world! 
 + 
 +tmatejuk@node090:~$ exit 
 +tmatejuk@jumphost-17:~$
 </code> </code>
  
  

This website uses cookies. By using the website, you agree with storing cookies on your computer. Also, you acknowledge that you have read and understand our Privacy Policy. If you do not agree, please leave the website.

More information