===== Anthill ver 0.3 =====

[[anthill_hardware_v03|Hardware]]

[[anthill_soft_v03|Software]]


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Before sending request to install new software on computing nodes :
  * use slurm interactive session and check ( it is probably already installed )
  * if it is not installed yet, but is is not available in standard repositories consider installing it from source in user space. You can find some examples how to do it bellow.
  * if you are not familiar with compiling software, feel free to ask
  * if you are not familiar with distributed computing and need help with computing job optimalization, also feel free to ask


Software related issues ( how to compile, how to use, benchmark, ... ) :

[[anthill_sri001|software CD-HIT, performance tests, more...]] \\
[[anthill_sri011|software rMATS, performance tests, more...]] \\
[[anthill_sri012|software STAR, performance tests, more...]] \\
[[anthill_sri013|massive ftp downloads with cluster, more...]] \\
[[anthill_sri015|sra-toolkit ( prefetch with ascp ), more...]] \\
[[anthill_sri016|software AdapterRemoval, how to install and use, more...]] \\
[[anthill_sri017|software preseq, how to install and use, more...]] \\
[[anthill_sri018|software GLIMPSE2, how to install, more...]] \\

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